Scott Oakes’s laboratory studies how mammalian cells commit “suicide” in response to various forms of damage and what goes wrong with this process in cancer and other diseases. In particular, they focus on a type of stress that occurs when the cell’s protein folding factory—an organelle called the endoplasmic reticulum—is overwhelmed and protein quality control fails. He is actively engaged in developing drugs to control cell fate under these conditions, which have potential to benefit patients with diseases from cancer to neurodegeneration.
Dana-Farber Cancer Institute, Harvard Medical School
Boston, MA
Postdoctoral Scholar - Biochemistry & Cell Biology
2005Brigham and Women's Hospital, Harvard Medical School
Boston, MA
Residency - Pathology
2000University of Connecticut School of Medicine
Farmington, CT
M.D. - Medicine
1998Howard Hughes Medical Institute, National Institutes of Health
Bethesda, M.D.
Research Scholar - Immunology
1996Elmira College
Elmira, NY
B.A. - Biochemistry
1993Direct inhibition of tumor hypoxia response with synthetic transcriptional repressors.
Direct inhibition of tumor hypoxia response with synthetic transcriptional repressors. Nat Chem Biol. 2024 Aug 30.
PMID: 39215099Inhibition of the eukaryotic initiation factor-2a kinase PERK decreases risk of autoimmune diabetes in mice.
Inhibition of the eukaryotic initiation factor-2a kinase PERK decreases risk of autoimmune diabetes in mice. J Clin Invest. 2024 Jun 18; 134(16).
PMID: 38889047Inhibition of the Eukaryotic Initiation Factor-2-a Kinase PERK Decreases Risk of Autoimmune Diabetes in Mice.
Inhibition of the Eukaryotic Initiation Factor-2-a Kinase PERK Decreases Risk of Autoimmune Diabetes in Mice. bioRxiv. 2024 Jun 03.
PMID: 38895427Unfolding emergency calls stress granules to the ER.
Unfolding emergency calls stress granules to the ER. Nat Cell Biol. 2024 Jun; 26(6):845-846.
PMID: 38822214Dissecting tumor transcriptional heterogeneity from single-cell RNA-seq data by generalized binary covariance decomposition.
Dissecting tumor transcriptional heterogeneity from single-cell RNA-seq data by generalized binary covariance decomposition. bioRxiv. 2024 May 26.
PMID: 37645713The Integrated Stress Response in Pancreatic Development, Tissue Homeostasis, and Cancer.
The Integrated Stress Response in Pancreatic Development, Tissue Homeostasis, and Cancer. Gastroenterology. 2024 Dec; 167(7):1292-1306.
PMID: 38768690Stress and human health in diabetes: A report from the 19th Chicago Biomedical Consortium symposium.
Stress and human health in diabetes: A report from the 19th Chicago Biomedical Consortium symposium. J Clin Transl Sci. 2023; 7(1):e263.
PMID: 38229904DISSECTING TUMOR TRANSCRIPTIONAL HETEROGENEITY FROM SINGLE-CELL RNA-SEQ DATA BY GENERALIZED BINARY COVARIANCE DECOMPOSITION.
DISSECTING TUMOR TRANSCRIPTIONAL HETEROGENEITY FROM SINGLE-CELL RNA-SEQ DATA BY GENERALIZED BINARY COVARIANCE DECOMPOSITION. bioRxiv. 2023 Aug 17.
PMID: 37645713Erratum. Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings. Diabetes 2023;72:433-448.
Erratum. Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings. Diabetes 2023;72:433-448. Diabetes. 2023 Aug 01; 72(8):1173.
PMID: 37116182Deletion of the Unfolded Protein Response Transducer IRE1a Is Detrimental to Aging Photoreceptors and to ER Stress-Mediated Retinal Degeneration.
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Deletion of the Unfolded Protein Response Transducer IRE1a Is Detrimental to Aging Photoreceptors and to ER Stress-Mediated Retinal Degeneration. Invest Ophthalmol Vis Sci. 2023 04 03; 64(4):30.
PMID: 37097227Investigator Award
Neuroendocrine Tumor Research Foundation (NETRF)
2023Outstanding Investigator Award
American Society for Investigative Pathology (ASIP)
2019Stein Innovation Award
Research to Prevent Blindness , Inc.
2018Outstanding Mentor Award
University of California San Francisco
2017Neuroendocrine Tumor Award
American Association for Cancer Research (AACR)
2015 - 2017Scholar-Innovator Award
Harrington Discovery Institute
2013 - 2015Elected Member
American Society for Clinical Investigation (ASCI)
2013Research Scholar Award
American Cancer Society
2012 - 2015Early Career Physician Scientist Award
Howard Hughes Medical Institute
2007 - 2011Junior Investigator Award
American Cancer Society
2006 - 2007Mentored Clinical Scientist Development Award (K08)
NIAMS, NIH
2003 - 2008Research Scholar
Howard Hughes Medical Institute
1995 - 1996Valedictorian
Elmira College
1993